Optimizing computational resource management for the scientific gateways ecosystems based on the service‐oriented paradigm

Journal article

Martins de Oliveira, Edvard, Estrella, Júlio Cézar, Botazzo Delbem, Alexandre Claudio, Souza Pardo, Mário Henrique, Guzzo da Costa, Fausto, Defelicibus, Alexandre and Reiff‐Marganiec, Stephan 2020. Optimizing computational resource management for the scientific gateways ecosystems based on the service‐oriented paradigm. Software Practice and Experience. 50 (6), pp. 899-924. https://doi.org/10.1002/spe.2808
AuthorsMartins de Oliveira, Edvard, Estrella, Júlio Cézar, Botazzo Delbem, Alexandre Claudio, Souza Pardo, Mário Henrique, Guzzo da Costa, Fausto, Defelicibus, Alexandre and Reiff‐Marganiec, Stephan
Abstract

Science Gateways provide portals for experiments execution, regardless of the users' computational background. Nowadays its construction and performance need enhancement in terms of resource provision and task scheduling. We present the Modular Distributed Architecture to support the Protein Structure Prediction (MDAPSP), a Service‐Oriented Architecture for management and construction of Science Gateways, with resource provisioning on a heterogeneous environment. The Decision Maker, central module of MDAPSP, defines the best computational environment according to experiment parameters. The proof of concept for MDAPSP is presented in WorkflowSim, with two novel schedulers. Our results demonstrate good Quality of Service (QoS), capable of correctly distributing the workload, fair response times, providing load balance, and overall system improvement. The study case relies on PSP algorithms and the Galaxy framework, with monitoring experiments to show the bottlenecks and critical aspects.

KeywordsSoftware; Science Gateways; Service Oriented Architecture; Optimization; Protein Structure Prediction; WorkflowSim; Scientific Workflow
Year2020
JournalSoftware Practice and Experience
Journal citation50 (6), pp. 899-924
PublisherWiley
ISSN0038-0644
1097-024X
Digital Object Identifier (DOI)https://doi.org/10.1002/spe.2808
Web address (URL)http://hdl.handle.net/10545/624830
http://onlinelibrary.wiley.com/termsAndConditions#vor
hdl:10545/624830
Publication dates26 Feb 2020
Publication process dates
Deposited27 May 2020, 13:32
Accepted09 Jan 2020
ContributorsFederal University of Itajubá, Brazil, University of Sao Paulo, Brazil, A.C. Camargo Cancer Center, Sao Paulo, Brazil and University of Derby
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