The development of an eDNA based detection method for the invasive shrimp Dikerogammarus haemobaphes
Journal article
Mauvisseau, Quentin, Troth, Chris, Young, Emily, Burian, Alfred and Sweet, Michael 2019. The development of an eDNA based detection method for the invasive shrimp Dikerogammarus haemobaphes. Management of Biological Invasions. 10 (3), pp. 449-460. https://doi.org/10.3391/mbi.2019.10.3.03
| Authors | Mauvisseau, Quentin, Troth, Chris, Young, Emily, Burian, Alfred and Sweet, Michael |
|---|---|
| Abstract | Dikerogammarus haemobaphes is a freshwater gammarid crustacean native to the Ponto-Caspian region. However, the species is rapidly spreading throughout Western Europe and is classed as a highly invasive species. Here we present a novel eDNA assay aimed at detecting D. haemobaphes and demonstrate its suitability with validation steps conducted in-silico (computer simulations), ex-situ (test of specificity using closely related species) and in-situ (within the field). A survey of freshwater systems in the West-Midlands, United Kingdom, highlighted that D. haemobaphes was present in 26 out of the 39 sites assessed. We conclude that eDNA detection for D. haemobaphes is a promising tool for assessing and mapping the presence/distribution of this invasive amphipod. |
| Keywords | invasive species; eDNA; limit of detection; early detection; freshwater systems; environmental DNA |
| Year | 2019 |
| Journal | Management of Biological Invasions |
| Journal citation | 10 (3), pp. 449-460 |
| Publisher | Regional Euro-Asian Biological Invasions Centre Oy (REABIC) |
| ISSN | 1989-8649 |
| Digital Object Identifier (DOI) | https://doi.org/10.3391/mbi.2019.10.3.03 |
| Web address (URL) | https://www.reabic.net/journals/mbi/2019/Issue3.aspx |
| hdl:10545/624403 | |
| Output status | Published |
| Publication dates | 06 Jun 2019 |
| Publication process dates | |
| Deposited | 15 Jan 2020, 16:14 |
| Accepted | 19 Mar 2019 |
| Contributors | University of Derby and Surescreen Scientifics Ltd, Morley |
| File | File Access Level Restricted |
Permalink -
https://repository.derby.ac.uk/item/92vvw/the-development-of-an-edna-based-detection-method-for-the-invasive-shrimp-dikerogammarus-haemobaphes
398
total views0
total downloads8
views this month0
downloads this month
Export as
Related outputs
Half of Atlantic reef-building corals at elevated risk of extinction due to climate change and other threats
Sweet, M. 2024. Half of Atlantic reef-building corals at elevated risk of extinction due to climate change and other threats. PLos ONE. 19 (11). https://doi.org/10.1371/journal.pone.0309354When Methodological Innovation Changes the Game: A 10-Year Review of Environmental DNA (eDNA) Applied to Crayfish
Baudry, T., Vasselon, V., Delaunay, C., Sweet, M. and Grandjean, F. 2024. When Methodological Innovation Changes the Game: A 10-Year Review of Environmental DNA (eDNA) Applied to Crayfish. Aquatic Conservation: Marine and Freshwater Ecosystems. 34 (9), pp. 1-15. https://doi.org/10.1002/aqc.4245Cushion sea-star removal enhances coral restoration practices and limits background mortality on recovering reefs
Sweet, M., Walker, M., Mezger, S. D., Clarke, A., Pessoa, A., Leonhardt, J., Allahgholi, A. and Craggs, J. 2024. Cushion sea-star removal enhances coral restoration practices and limits background mortality on recovering reefs. Coral Reefs. 43, p. 1455–1468. https://doi.org/10.1007/s00338-024-02550-4Selective breeding enhances coral heat tolerance to marine heatwaves
Humanes, A., Lachs, L., Beauchamp, E., Bukurou, L., Buzzoni, D., Bythell, J., Craggs, J., de la Torre Cerro, R., Edwards, A. J., Golbuu, Y., Martinez, H. M., Palmowski, P., van der Steeg, E., Sweet, M., Ward, A., Wilson, A. and Guest, J. 2024. Selective breeding enhances coral heat tolerance to marine heatwaves. Nature Communications. 15 (8703). https://doi.org/10.1038/s41467-024-52895-1The bacterial microbiome of symbiotic and menthol-bleached polyps of long-term aquarium-reared Galaxea fascicularis
Puntin, J., Wong, J., Röthig, T., Baker, D., Sweet, M. and Ziegler, M. 2024. The bacterial microbiome of symbiotic and menthol-bleached polyps of long-term aquarium-reared Galaxea fascicularis. Peer Community Journal . 4, pp. 1-24. https://doi.org/10.24072/pcjournal.429Environmental DNA can inform the trade-off between proactive and reactive strategies for crayfish conservation
Greenhalgh, J. A., Banks, R., Collins, R. A., Juta, U., Reeves, S., Siggery, B., Sweet, M., Tibbitts, J., Saxon, A. D., Warwick, K. E., Wiseman, G., Jones, G. and Genner, M. J. 2024. Environmental DNA can inform the trade-off between proactive and reactive strategies for crayfish conservation. Environmental DNA. pp. 1-11.Field collections and environmental DNA surveys reveal topographic complexity of coral reefs as a predictor of cryptobenthic biodiversity across small spatial scales
Brodnicke, O. B., Jensen, M. R., Thomsen, P. F., Brorly, T., Andersen, B. L., Knudsen, S. W., Præbel, K., Brandl, S. J., Sweet, M., Møller, P. R. and Worsaae, K. 2024. Field collections and environmental DNA surveys reveal topographic complexity of coral reefs as a predictor of cryptobenthic biodiversity across small spatial scales. Environmental DNA. pp. 1-15. https://doi.org/10.1002/edn3.545Spatio-temporal variation in progression rates of black band disease between Pramuka Island and Pari Island of the Seribu Islands, Indonesia
Sweet, M. 2024. Spatio-temporal variation in progression rates of black band disease between Pramuka Island and Pari Island of the Seribu Islands, Indonesia. Frontiers in Marine Science. 11, pp. 1-10. https://doi.org/10.3389/fmars.2024.1239956The Effect of Pollen on Coral Health
Barker, T., Bulling, M., Thomas, V. and Sweet, M. 2023. The Effect of Pollen on Coral Health. Biology. 12 (12), pp. 1-12. https://doi.org/10.3390/biology12121469Horizon scanning the application of probiotics for wildlife
Neus Garcias-Bonet, Anna Roik., Braden Tierne., Francisca C. García., Helena D.M. Villela, Ashley M. Dungan., Kate M. Quigley, Sweet, M., Gabriele, Berg., Lone, Gram., David G. Bourne., Blake, Ushijima., Maggie, Sogin., Lone, Hoj., Gustavo, Duarte, Heribert, Hirt, Kornelia, Smalla, Alexandre S. Rosado., Susana, Carvalho, Rebecca, Vega Thurber, Maren, Ziegler, Christopher E. Mason, Madeleine J.H. van Oppen, hristian R. Voolstra and Raquel S. Peixoto 2023. Horizon scanning the application of probiotics for wildlife. Trends in Microbiology. pp. 1-18. https://doi.org/10.1016/j.tim.2023.08.012Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem
Brodnicke, O., Meyer, H. K., Busch, K., Xavier, J. R., Knudsen, S. W., Møller, P. R., Hentschel, U. and Sweet, M. 2023. Deep-sea sponge derived environmental DNA analysis reveals demersal fish biodiversity of a remote Arctic ecosystem . Environmental DNA. pp. 1-13. https://doi.org/10.1002/edn3.451Human-induced salinity changes impact marine organisms and ecosystems
Till Röthig, Stacey M. Trevathan-Tackett,, Christian R. Voolstra, Cliff Ross, Samuel Chaffron, Paul J. Durack, Laura M. Warmuth and Sweet, M. 2023. Human-induced salinity changes impact marine organisms and ecosystems. Global Change Biology. pp. 1-19. https://doi.org/10.1111/gcb.16859Beyond the Symbiodiniaceae: diversity and role of microeukaryotic coral symbionts
Anthony M. Bonacolta, Bradley A. Weiler, Teresa Porta-Fitó, Michael Sweet, Patrick Keeling and Javier del Campo 2023. Beyond the Symbiodiniaceae: diversity and role of microeukaryotic coral symbionts. Coral Reefs. 42, pp. 1-11. https://doi.org/10.1007/s00338-023-02352-0Microbiome Engineering: A Promising Approach to Improve Coral Health
Li, J., Yang, Q., Dong, J., Sweet, M., Zhang, Y., Liu, C., Zhang, Y., Tang, X., Zhang, W. and Zhang, S. 2022. Microbiome Engineering: A Promising Approach to Improve Coral Health. Engineering . 28, pp. 105-116. https://doi.org/10.1016/j.eng.2022.07.010Harnessing the microbiome to prevent global biodiversity loss
Raquel S. Peixoto, Christian R. Voolstra, Michael Sweet, Carlos M. Duarte, Susana Carvalho, Helena Villela, Jeantine E. Lunshof, Lone Gram, Douglas C. Woodhams, Jens Walter, Anna Roik, Ute Hentschel, Rebecca Vega Thurber, Brendan Daisley, Blake Ushijima, Daniele Daffonchio, Rodrigo Costa, Tina Keller-Costa, Jeff S. Bowman, Alexandre S. Rosado, Gregor Reid, Christopher E. Mason, Jenifer B. Walke, Torsten Thomas and Gabriele Berg 2022. Harnessing the microbiome to prevent global biodiversity loss. Nature Microbiology. Vol 7 (Issue 11), pp. 1726 - 1735. https://doi.org/10.1038/s41564-022-01173-1Harnessing the Power of Model Organisms To Unravel Microbial Functions in the Coral Holobiont
Giulia Puntin, Michael Sweet, Sebastian Fraune, Mónica Medina, Koty Sharp, Virginia M. Weis and Maren Ziegler 2022. Harnessing the Power of Model Organisms To Unravel Microbial Functions in the Coral Holobiont. Microbiology and Molecular Biology Reviews. Vol 86 (Issue 4). https://doi.org/10.1128/mmbr.00053-22The reef-building coral Galaxea fascicularis: a new model system for coral symbiosis research
Giulia Puntin, Jamie Craggs, Róisín Hayden, Kara E. Engelhardt, Shelby McIlroy, Michael Sweet, David M. Baker and Maren Ziegler 2022. The reef-building coral Galaxea fascicularis: a new model system for coral symbiosis research. Coral Reefs. pp. 1-14. https://doi.org/10.1007/s00338-022-02334-8Cultured Bacteria Provide Insight into the Functional Potential of the Coral-Associated Microbiome
Li, J., Zou, Y., Li, Q., Bourne, D. G., Sweet, M., Liu, C., Guo, A. and Zhang, S. 2022. Cultured Bacteria Provide Insight into the Functional Potential of the Coral-Associated Microbiome. msystems. 7 (4), pp. 1-18. https://doi.org/10.1128/msystems.00327-22Predation increases multiple components of microbial diversity in activated sludge communities.
Burian, A., Pinn, D., Peralta-Maraver, I., Sweet, M., Mauvisseau, Q., Eyice, O., Bulling, M., Röthig, T. and Kratina, P. 2022. Predation increases multiple components of microbial diversity in activated sludge communities. ISME. 16, p. 1086–1094. https://doi.org/10.1038/s41396-021-01145-z
Sea urchin diseases: Effects from individuals to ecosystems
Sweet, Michael 2020. Sea urchin diseases: Effects from individuals to ecosystems. in: Developments in Aquaculture and Fisheries Science Elsevier.A review of the diversity and impact of invasive non-native species in tropical marine ecosystems
Alidoost Salimi, Parisa, Creed, Joel C., Esch, Melanie M., Fenner, Douglas, Jaafar, Zeehan, Levesque, Juan C., Montgomery, Anthony D., Alidoost Salimi, Mahsa, Edward, J. K. Patterson, Raj, K. Diraviya and Sweet, Michael 2021. A review of the diversity and impact of invasive non-native species in tropical marine ecosystems. Marine Biodiversity Records. 14 (1). https://doi.org/10.1186/s41200-021-00206-8Extending the natural adaptive capacity of coral holobionts
Christian R. Voolstra, David J. Suggett, Raquel S. Peixoto, John E. Parkinson, Kate M. Quigley, Cynthia B. Silveira, Michael Sweet, Erinn M. Muller, Daniel J. Barshis, David G. Bourne and Manuel Aranda 2021. Extending the natural adaptive capacity of coral holobionts. Nature Reviews Earth & Environment. Vol 2 (2021), p. 747–762. https://doi.org/10.1038/s43017-021-00214-3Coral microbiome manipulation elicits metabolic and genetic restructuring to mitigate heat stress and evade mortality.
Sweet, M. 2021. Coral microbiome manipulation elicits metabolic and genetic restructuring to mitigate heat stress and evade mortality. Science Advances. 7 (33), pp. 1-16. https://doi.org/10.1126/sciadv.abg3088Investing in Blue Natural Capital to Secure a Future for the Red Sea Ecosystems
Cziesielski, Maha J., Duarte, Carlos M., Aalismail, Nojood, Al-Hafedh, Yousef, Anton, Andrea, Baalkhuyur, Faiyah, Baker, A., Balke, Thorsten, Baums, Iliana B., Berumen, Michael, Chalastani, Vasiliki I., Cornwell, Brendan, Daffonchio, Daniele, Diele, Karen, Farooq, Ehtesaam, Gattuso, Jean-Pierre, He, Song, Lovelock, Catherine E., Mcleod, Elizabeth, Macreadie, Peter I., Marba, Nuria, Martin, Cecilia, Muniz-Barreto, Marcelle, Kadinijappali, Kirshnakumar P., Prihartato, Perdana, Rabaoui, Lotfi, Saderne, Vincent, Schmidt-Roach, Sebastian, Suggett, David J., Sweet, Michael, Statton, John, Teicher, Sam, Trevathan-Tackett, Stacey M., Joydas, Thadickal V., Yahya, Razan and Aranda, Manuel 2021. Investing in Blue Natural Capital to Secure a Future for the Red Sea Ecosystems. Frontiers in Marine Science. 7. https://doi.org/10.3389/fmars.2020.603722Mapping a super-invader in a biodiversity hotspot, an eDNA-based success story
Baudry, Thomas, Mauvisseau, Quentin, Goût, Jean-Pierre, Arqué, Alexandre, Delaunay, Carine, Smith-Ravin, Juliette, Sweet, Michael and Grandjean, Frédéric 2021. Mapping a super-invader in a biodiversity hotspot, an eDNA-based success story. Ecological Indicators. 126, pp. 1-9. https://doi.org/10.1016/j.ecolind.2021.107637Improving the reliability of eDNA data interpretation
Burian, Alfred, Mauvisseau, Quentin, Bulling, Mark, Domisch, Sami, Qian, Song and Sweet, Michael 2021. Improving the reliability of eDNA data interpretation. Molecular Ecology Resources. 21, p. 1422–1433.. https://doi.org/10.1111/1755-0998.13367Seasonality, DNA degradation and spatial heterogeneity as drivers of eDNA detection dynamics
Troth, Christopher R., Sweet, Michael J., Nightingale, Jen and Burian, Alfred 2021. Seasonality, DNA degradation and spatial heterogeneity as drivers of eDNA detection dynamics. Science of The Total Environment. 768, p. 144466. https://doi.org/10.1016/j.scitotenv.2020.144466Species-Specific Variations in the Metabolomic Profiles of Acropora hyacinthus and Acropora millepora Mask Acute Temperature Stress Effects in Adult Coral Colonies
Sweet, Michael, Bulling, Mark, Varshavi, Dorsa, Lloyd, Gavin R., Jankevics, Andris, Najdekr, Lukáš, Weber, Ralf J. M., Viant, Mark R. and Craggs, J. 2021. Species-Specific Variations in the Metabolomic Profiles of Acropora hyacinthus and Acropora millepora Mask Acute Temperature Stress Effects in Adult Coral Colonies. Frontiers in Marine Science. 8. https://doi.org/10.3389/fmars.2021.574292Insights into the cultured bacterial fraction of corals
Michael Sweet, Helena Villela, Tina Keller-Costa, Rodrigo Costa, Stefano Romano, David Bourne, Anny Cardenas, Megan Huggett, Allison Kerwin, Felicity Kuek, Monica Medina, Julie Meyer, Moritz Müller, Joseph Pollock, Michael Rappé, Mathieu Sere, Koty Sharp, Christian Voolstra, Maren Ziegler and Raquel Peixoto 2021. Insights into the cultured bacterial fraction of corals. American Society for Microbiology. https://doi.org/10.21203/rs.3.rs-105866/v1Corals as canaries in the coalmine: towards the incorporation of marine ecosystems into the ‘One Health’ concept
Michael Sweet, Mark Bulling and Burian, A. 2021. Corals as canaries in the coalmine: towards the incorporation of marine ecosystems into the ‘One Health’ concept. Elsevier BV. https://doi.org/10.31219/osf.io/gv6s7Going with the flow: How corals in high‐flow environments can beat the heat
Fifer, James, Bentlage, Bastian, Lemer, Sarah, Fujimura, Atsushi G., Sweet, Michael and Raymundo, Laurie J. 2021. Going with the flow: How corals in high‐flow environments can beat the heat. Molecular Ecology. https://doi.org/10.1111/mec.15869Development and application of eDNA-based tools for the conservation of white-clawed crayfish
Christopher R. Troth, Alfred Burian, Quentin Mauvisseau, Mark Bulling, Jen Nightingale, Christophe Mauvisseau, Michael J. Sweet and Sweet, M. 2020. Development and application of eDNA-based tools for the conservation of white-clawed crayfish. Elsevier. https://doi.org/10.1101/732941Heat waves are a major threat to turbid coral reefs in Brazil
Duarte, Gustavo A. S., Villela, Helena D. M., Deocleciano, Matheus, Silva, Denise, Barno, Adam, Cardoso, Pedro M., Vilela, Caren L. S., Rosado, Phillipe, Messias, Camila S. M. A., Chacon, Maria Alejandra, Santoro, Erika P., Olmedo, Daniele B., Szpilman, Marcelo, Rocha, Luiz A., Sweet, Michael and Peixoto, Raquel S. 2020. Heat waves are a major threat to turbid coral reefs in Brazil. Frontiers in Marine Science. 7. https://doi.org/10.3389/fmars.2020.00179Reliable eDNA detection and quantification of the European weather loach (Misgurnus fossilis)
Brys, Rein, Halfmaerten, David, Neyrinck, Sabrina, Mauvisseau, Quentin, Auwerx, Johan, Sweet, Michael and Mergeay, Joachim 2020. Reliable eDNA detection and quantification of the European weather loach (Misgurnus fossilis). Journal of Fish Biology. pp. 1-16. https://doi.org/10.1111/jfb.14315Editorial: Coral Reefs in the Anthropocene – Reflecting on 20 Years of Reef Conservation UK
Andradi-Brown, Dominic A., Banaszak, Anastazia T., Frazer, Thomas K., Gilchrist, Hannah, Harborne, Alastair R., Head, Catherine E. I., Koldewey, Heather J., Levy, Emma, Richards, Kirsty, Short, Rebecca, Sweet, Michael, Teleki, Kristian, Voolstra, Christian R., Wilson, Bryan, Wood, Elizabeth, Yarlett, Robert T. and Curnick, David J. 2020. Editorial: Coral Reefs in the Anthropocene – Reflecting on 20 Years of Reef Conservation UK. Frontiers in Marine Science. 7. https://doi.org/10.3389/fmars.2020.00364Minimum drift times infer trajectories of ghost nets found in the Maldives
Stelfox, Martin, Lett, Christophe, Reid, Geraldine, Souch, Graham and Sweet, Michael 2020. Minimum drift times infer trajectories of ghost nets found in the Maldives. Marine Pollution Bulletin. 154, pp. 1-13. https://doi.org/10.1016/j.marpolbul.2020.111037Completing the life cycle of a broadcast spawning coral in a closed mesocosm
Craggs, J., Guest, James, Davies, M. and Sweet, Michael 2020. Completing the life cycle of a broadcast spawning coral in a closed mesocosm. Invertebrate Reproduction & Development. 64 (3), pp. 244-247. https://doi.org/10.1080/07924259.2020.1759704Measuring actions for nature—development and validation of a pro-nature conservation behaviour scale
Barbett, Lea, Stupple, Edward, Sweet, Michael, Schofield, M. and Richardson, Miles 2020. Measuring actions for nature—development and validation of a pro-nature conservation behaviour scale. Sustainability. https://doi.org/10.3390/su12124885Tracing the origin of olive ridley turtles entangled in ghost nets in the Maldives: A phylogeographic assessment of populations at risk
Stelfox, M., Burian, A., Shanker, Kartik, Rees, Alan F., Jean, Claire, Willson, Maïa S., Manik, Nashwa Ahmed and Sweet, Michael 2020. Tracing the origin of olive ridley turtles entangled in ghost nets in the Maldives: A phylogeographic assessment of populations at risk. Biological Conservation. 245, pp. 1-10. https://doi.org/10.1016/j.biocon.2020.108499Improving detection capabilities of a critically endangered freshwater invertebrate with environmental DNA using digital droplet PCR
Mauvisseau, Q., John Davy-Bowker, Mark Bulling, Rein Brys, Sabrina Neyrinck, Christopher Troth and Michael Sweet 2019. Improving detection capabilities of a critically endangered freshwater invertebrate with environmental DNA using digital droplet PCR. https://doi.org/10.1101/661447Early detection of an emerging invasive species: eDNA monitoring of a parthenogenetic crayfish in freshwater systems
Mauvisseau, Quentin, Sweet, Michael, Lyko, Frank, Andriantsoa, Ranja and Tonges, Sina 2019. Early detection of an emerging invasive species: eDNA monitoring of a parthenogenetic crayfish in freshwater systems. Management of Biological Invasions. 10 (3), pp. 461-472. https://doi.org/10.3391/mbi.2019.10.3.04Untangling the origin of ghost gear within the Maldivian archipelago and its impact on olive ridley (Lepidochelys olivacea) populations
Stelfox, M., Bulling, M and Sweet, M 2019. Untangling the origin of ghost gear within the Maldivian archipelago and its impact on olive ridley (Lepidochelys olivacea) populations. Endangered Species Research. 40, pp. 309-320. https://doi.org/10.3354/esr00990Compositional homogeneity in the pathobiome of a new, slow-spreading coral disease
Sweet, Michael, Burian, Alfred, Fifer, James, Bulling, Mark, Elliott, D. and Raymundo, Laurie 2019. Compositional homogeneity in the pathobiome of a new, slow-spreading coral disease. Microbiome. 7 (1), pp. 1-14. https://doi.org/10.1186/s40168-019-0759-6Customized medicine for corals
Sweet, Michael, Peixoto, Raquel and Bourne, David 2019. Customized medicine for corals. Frontiers in Marine Scinece. pp. 1-5. https://doi.org/10.3389/fmars.2019.00686Ex situ co culturing of the sea urchin, Mespilia globulus and the coral Acropora millepora enhances early post-settlement survivorship
Craggs, Jamie, Guest, James, Bulling, Mark and Sweet, Michael 2019. Ex situ co culturing of the sea urchin, Mespilia globulus and the coral Acropora millepora enhances early post-settlement survivorship. Scientific Reports. 9 (12984), pp. 1-12. https://doi.org/10.1038/s41598-019-49447-9Influence of accuracy, repeatability and detection probability in the reliability of species-specific eDNA based approaches
Mauvisseau, Quentin, Burian, Alfred, Gibson, Ceri, Brys, Rein, Ramsey, Andrew and Sweet, Michael 2019. Influence of accuracy, repeatability and detection probability in the reliability of species-specific eDNA based approaches. Scientific Reports. 9 (580), pp. 1-10. https://doi.org/10.1038/s41598-018-37001-yComparative evaluation of neuro-linguistic programming
Kotera, Y. and Sweet, Michael 2019. Comparative evaluation of neuro-linguistic programming. British Journal of Guidance & Counselling. https://doi.org/10.1080/03069885.2019.1622075Combining ddPCR and environmental DNA to improve detection capabilities of a critically endangered freshwater invertebrate
Mauvisseau, Quentin, Davy-Bowker, John, Bulling, Mark, Brys, Rein, Neyrinck, Sabrina, Troth, Christopher and Sweet, Michael 2019. Combining ddPCR and environmental DNA to improve detection capabilities of a critically endangered freshwater invertebrate. Scientific Reports. 9 (14064), pp. 1-9. https://doi.org/10.1038/s41598-019-50571-9Involving recreational snorkelers in inventory improvement or creation: a case study in the Indian Ocean
Bourjon, Philippe, Ducarme, Frédéric, Quod, Jean-Pascal and Sweet, M. 2018. Involving recreational snorkelers in inventory improvement or creation: a case study in the Indian Ocean. CBM - Cahiers de Biologie Marine.. https://doi.org/10.21411/cbm.a.b05fc714Mass mortality hits gorgonian forests at Montecristo Island.
Turicchia, Eva, Abbiati, Marco, Sweet, Michael J. and Ponti, Massimo 2018. Mass mortality hits gorgonian forests at Montecristo Island. Diseases of Aquatic Organisms. https://doi.org/10.3354/dao03284Maintaining natural spawning timing in Acropora corals following long distance inter-continental transportation.
Craggs, Jamie, Guest, James R., Brett, Aaron, Davis, Michelle and Sweet, Michael J. 2018. Maintaining natural spawning timing in Acropora corals following long distance inter-continental transportation. Journal of zoo and aquarium research. https://doi.org/10.19227/jzar.v6i2.317Topographic shading influences cryoconite morphodynamics and carbon exchange.
Cook, J. M., Sweet, Michael J., Cavalli, Ottavia, Taggart, Angus and Edwards, Arwyn 2018. Topographic shading influences cryoconite morphodynamics and carbon exchange. Arctic, Antarctic, and Alpine Research.. https://doi.org/10.1080/15230430.2017.1414463Rediscovery of the critically endangered ‘scarce yellow sally stonefly’ Isogenus nubecula in United Kingdom after a 22 year period of absence.
Davy-Bowker, John, Hammett, Michael J., Mauvisseau, Quentin and Sweet, Michael J. 2018. Rediscovery of the critically endangered ‘scarce yellow sally stonefly’ Isogenus nubecula in United Kingdom after a 22 year period of absence. Zootaxa. https://doi.org/10.11646/zootaxa.4394.2.12The use of gamification in the teaching of disease epidemics and pandemics.
Robinson, Louise, Turner, Ian J. and Sweet, Michael J. 2018. The use of gamification in the teaching of disease epidemics and pandemics. FEMS Microbiology Letters. 365 (11), pp. 1-4. https://doi.org/10.1093/femsle/fny111Topographic shading influences cryoconite morphodynamics and carbon exchange.
Cook, J. M., Sweet, Michael J., Cavalli, O., Taggart, A. and Edwards, A. 2018. Topographic shading influences cryoconite morphodynamics and carbon exchange. Arctic, Antarctic, and Alpine Research.. https://doi.org/10.1080/15230430.2017.1414463Maintaining natural spawning timing in Acropora corals following long distance inter-continental transportation.
Craggs, Jamie, Guest, James R., Brett, Aaron, Davis, Michelle and Sweet, Michael J. 2018. Maintaining natural spawning timing in Acropora corals following long distance inter-continental transportation. Journal of zoo and aquarium research. https://doi.org/10.19227/jzar.v6i2.317First detection of a highly invasive freshwater amphipod (Crangonyx floridanus) in the United Kingdom
Mauvisseau, Q., John Davy-Bowker, David Bryson, Graham R. Souch, Burian, A. and Michael Sweet 2018. First detection of a highly invasive freshwater amphipod (Crangonyx floridanus) in the United Kingdom. Regional Euro-Asian biological Invasions Centre. https://doi.org/10.1101/437301An Introduction to Molecular Ecology
Rowe, G., Sweet, M. and Trevor Beebee 2017. An Introduction to Molecular Ecology. Oxford University Press.Symbiotic microbes from marine invertebrates: Driving a new era of natural product drug discovery.
Blockley, Alix, Elliott, D., Roberts, Adam and Sweet, Michael J. 2017. Symbiotic microbes from marine invertebrates: Driving a new era of natural product drug discovery. Diversity. 9 (4), pp. 1-13. https://doi.org/10.3390/d9040049Designer reefs and coral probiotics; great concepts but are they good practice?
Sweet, M., Ramsey, A. and Bulling, M. 2017. Designer reefs and coral probiotics; great concepts but are they good practice? Biodiversity. https://doi.org/10.1080/14888386.2017.1307786Inducing broadcast coral spawning ex situ: Closed system mesocosm design and husbandry protocol.
Craggs, Jamie, Guest, James R., Davis, Michelle, Simmons, Jeremy, Dashti, Ehsan and Sweet, Michael J. 2017. Inducing broadcast coral spawning ex situ: Closed system mesocosm design and husbandry protocol. Ecology and Evolution. https://doi.org/10.1002/ece3.3538Evidence for rapid, tide-related shifts in the microbiome of the coral Coelastrea aspera
Sweet, Michael J., Brown, Barbara E., Dunne, Richard P., Singleton, Ian and Bulling, Mark T. 2017. Evidence for rapid, tide-related shifts in the microbiome of the coral Coelastrea aspera. Coral Reefs. https://doi.org/10.1007/s00338-017-1572-yThe “resort effect”: Can tourist islands act as refuges for coral reef species?
Charlotte Moritz, Frédéric Ducarme, Sweet, M., Michael D. Fox, Brian Zgliczynski, Nizam Ibrahim, Ahmed Basheer, Kathryn A. Furby, Zachary R. Caldwell, Chiara Pisapia, Gabriel Grimsditch and Ameer Abdulla 2017. The “resort effect”: Can tourist islands act as refuges for coral reef species? Diversity and Distributions. https://doi.org/10.1111/ddi.12627On the importance of the microbiome and pathobiome in coral health and disease
Sweet, M. and Bulling, M. 2017. On the importance of the microbiome and pathobiome in coral health and disease. Frontiers in Marine Sciences. https://doi.org/10.3389/fmars.2017.00009'Yellow Syndrome' in scleractinian corals throughout Bintain District, Kepulauan Riau Province, Indonesia
Johan, O., Budianto, O. and Sweet, M. 2017. 'Yellow Syndrome' in scleractinian corals throughout Bintain District, Kepulauan Riau Province, Indonesia. Indonesia Aquaculture Journal. 12 (1), pp. 37-42. https://doi.org/10.15578/iaj.12.1.2017.37-42Variation in size frequency distribution of coral populations under different fishing pressures in two contrasting locations in the Indian Ocean.
Grimsditch, Gabriel, Pisapia, Chiara, Huck, M., Karisa, Juliet, Obura, David and Sweet, M. 2017. Variation in size frequency distribution of coral populations under different fishing pressures in two contrasting locations in the Indian Ocean. Marine Environmental Research. https://doi.org/10.1016/j.marenvres.2017.09.017Juvenile “black teatfish” in Maldives
Sweet, M., Ducarme, F. and Conand, C. 2016. Juvenile “black teatfish” in Maldives. SPC Beche-de-mer Information Bulletin #36. pp. 1-2.Coral responses to anthropogenic stress in the twenty-first century: an ecophysiological perspective
Sweet, M. and Brown B.E. 2016. Coral responses to anthropogenic stress in the twenty-first century: an ecophysiological perspective. in: Oceanography and Marine Biology CRC Press. pp. 271 - 314Is Acropora palmata recovering? A case study in Los Roques National Park, Venezula
Aldo Croquer, Francoise Cavada-Blanco, Ainhoa L Zubillaga, Esteban A Agudo-Adriani and Sweet, M. 2016. Is Acropora palmata recovering? A case study in Los Roques National Park, Venezula. PeerJ. (eCollection 2016). https://doi.org/10.7717/peerj.1539Baseline reef health surveys at Bangka Island (North Sulawesi, Indonesia) reveal new threats
Massimo Ponti, Francesca Fratangeli, Nicolò Dondi, Marco Segre Reinach, Clara Serra and Sweet, M. 2016. Baseline reef health surveys at Bangka Island (North Sulawesi, Indonesia) reveal new threats. PeerJ. https://doi.org/10.7717/peerj.2614The role of viruses in coral health and disease
Sweet, M. and John Bythell 2016. The role of viruses in coral health and disease. Journal of Invertebrate Biology. https://doi.org/10.1016/j.jip.2016.12.005Molecular changes in skin pigmented lesions of the coral trout Plectropomus leopardus
Adélaïde Lerebours, Emma C Chapman, Sweet, M., Jeanette M Rotchell and Michelle R Heupel 2016. Molecular changes in skin pigmented lesions of the coral trout Plectropomus leopardus. Marine Environmental Research. https://doi.org/10.1016/j.marenvres.2016.07.009Influence of Resource Availability on the Foraging Strategies of the Triangle Butterflyfish Chaetodon triangulum in the Maldives
Sweet, M. 2016. Influence of Resource Availability on the Foraging Strategies of the Triangle Butterflyfish Chaetodon triangulum in the Maldives. PLos ONE. https://doi.org/10.1371/journal.pone.0151923New disease outbreak affects two dominant sea urchin species associated with Australian temperate reefs
Sweet, M. and Bulling, M. 2016. New disease outbreak affects two dominant sea urchin species associated with Australian temperate reefs. Marine Ecological Progress Series. https://doi.org/10.3354/meps11750A review of ghost gear entanglement amongst marine mammals, reptiles and elasmobranchs
Martin Stelfox, Jillian Hudgins and Sweet, M. 2016. A review of ghost gear entanglement amongst marine mammals, reptiles and elasmobranchs. Marine Pollution Bulletin. https://doi.org/10.1016/j.marpolbul.2016.06.034Is Acropora Palmata recovering? A case study in Los Roques National Park, Venezuela
Croquer, Aldo, Cavada-Blanco, Francoise, Zubillaga, Ainhoa L., Agudo-Adriani, Esteban A. and Sweet, Michael J. 2016. Is Acropora Palmata recovering? A case study in Los Roques National Park, Venezuela. PeerJ. https://doi.org/10.7717/peerj.1539Metabolome-mediated biocryomorphic evolution promotes carbon fixation in Greenlandic cryoconite holes
Joseph M Cook, Arwyn Edwards, Bulling, M., Luis A J Mur, Sophie Cook, Jarishma K Gokul, Karen A Cameron, Sweet, M. and Tristram D L Irvine-Fynn 2016. Metabolome-mediated biocryomorphic evolution promotes carbon fixation in Greenlandic cryoconite holes. Environmental Microbiology. https://doi.org/10.1111/1462-2920.13349Coral responses to anthropogenic stress in the 21st Century – An ecophysiological perspective.
Sweet, Michael J. and Brown, Barbara E. 2016. Coral responses to anthropogenic stress in the 21st Century – An ecophysiological perspective. in: Taylor & Francis.Prevalence and Incidence of Black Band Disease of Scleractinian Corals in the Kepulauan Seribu Region of Indonesia
Johan, Ofri, Zamany, Neviaty P., Smith, David and Sweet, M. 2016. Prevalence and Incidence of Black Band Disease of Scleractinian Corals in the Kepulauan Seribu Region of Indonesia. Diversity. https://doi.org/10.3390/d8020011Microbial communities associated with healthy and white syndrome-affected Echinopora lamellose in aquaria and experimental treatment with the antibiotic ampicillin
Smith, D., Leary, P., Craggs, J., Bythell, J. and Sweet, M. 2015. Microbial communities associated with healthy and white syndrome-affected Echinopora lamellose in aquaria and experimental treatment with the antibiotic ampicillin. PLos ONE. 10 (3), pp. 1-17. https://doi.org/10.1371/journal.pone.0121780Identification of a bacterial pathogen associated with Porites white patch syndrome in the Western Indian Ocean
Mathieu G Séré, Pablo Tortosa, Pascale Chabanet, Jean-Pascal Quod, Sweet, M. and Michael H Schleyer 2015. Identification of a bacterial pathogen associated with Porites white patch syndrome in the Western Indian Ocean. Molecular Ecology. https://doi.org/10.1111/mec.13326Ciliate communities consistently associated with coral diseases
Sweet, Michael J. and Séré, Mathieu G. 2015. Ciliate communities consistently associated with coral diseases. Journal of Sea Research. https://doi.org/10.1016/j.seares.2015.06.008Fostering effective international collaboration for marine science in small island states
Hind, Edward J., Alexander, Steven M., Green, Stephanie J., Kritzer, Jacob P., Sweet, M., Johnson, Ayana Elizabeth, Amargós, Fabian P., Smith, Nicola S. and Angelie M. 2015. Fostering effective international collaboration for marine science in small island states. Frontiers in Marine Science. https://doi.org/10.3389/fmars.2015.00086Geographically conserved rates of background mortality among common reef-building corals in Lhaviyani Atoll, Maldives versus northern Great Barrier Reef, Australia
Sweet, M. 2015. Geographically conserved rates of background mortality among common reef-building corals in Lhaviyani Atoll, Maldives versus northern Great Barrier Reef, Australia. Marine Biology. 162 (8). https://doi.org/10.1007/s00227-015-2694-9Diseases in marine invertebrates associated with mariculture and commercial fisheries
Sweet, M. and Kelly S Bateman 2015. Diseases in marine invertebrates associated with mariculture and commercial fisheries. Journal of Sea Research. https://doi.org/10.1016/j.seares.2015.06.016Age-Related Shifts in Bacterial Diversity in a Reef Coral
Alex D Williams, Barbara E Brown, Lalita Putchim and Sweet, M. 2015. Age-Related Shifts in Bacterial Diversity in a Reef Coral. PLos ONE. 10 (2). https://doi.org/10.1371/journal.pone.0144902A novel sponge disease caused by a consortium of micro-organisms
Sweet, M. 2015. A novel sponge disease caused by a consortium of micro-organisms. Coral Reefs. https://doi.org/10.1007/s00338-015-1284-0Baseline coral disease surveys within three marine parks in Sabah, Borneo
Jennifer Miller, Sweet, M., Elizabeth Wood and John Bythell 2015. Baseline coral disease surveys within three marine parks in Sabah, Borneo. PeerJ. https://doi.org/10.7717/peerj.1391White Syndrome in Acropora muricata: Non-specific bacterial infection and ciliate histophagy
Sweet, M. and Bythell, J. 2015. White Syndrome in Acropora muricata: Non-specific bacterial infection and ciliate histophagy. Molecular Ecology. 24, p. 1150–1159. https://doi.org/10.1111/mec.13097The distribution and abundance of black band disease and white syndrome in Kepulauan Seribu, Indonesia
Johan, Ofri, Bengen, Dietriech Geoffrey, Zamani, Neviaty Putri, Suharsono and Sweet, M. 2015. The distribution and abundance of black band disease and white syndrome in Kepulauan Seribu, Indonesia. Journal of Biosciences. https://doi.org/10.1016/j.hjb.2015.09.001Soil contamination with silver nanoparticles reduces Bishop pine growth and ectomycorrhizal diversity on pine roots
Sweet, M. and I Singleton 2015. Soil contamination with silver nanoparticles reduces Bishop pine growth and ectomycorrhizal diversity on pine roots. Journal of Nanoparticle Research. https://doi.org/10.1007/s11051-015-3246-4A novel investigation of a blister-like syndrome in aquarium Echinopora lamellosa
David Smith, Peter Leary, Mark Bendall, Edmund Flach, Rachel Jones and Sweet, M. 2014. A novel investigation of a blister-like syndrome in aquarium Echinopora lamellosa. PLos ONE. https://doi.org/10.1371/journal.pone.0097018Experimental antibiotic treatment identifies potential pathogens of white band disease in the endangered Caribbean coral Acropora cervicornis
Sweet, M., A Croquer and J C Bythell 2014. Experimental antibiotic treatment identifies potential pathogens of white band disease in the endangered Caribbean coral Acropora cervicornis. Proc Roy Soc. https://doi.org/10.1098/rspb.2014.0094Decadal environmental ‘memory’ in a reef coral?
Brown B.E., Dunne R.P., Edwards A.J., Sweet, M. and Phongsuwan N. 2014. Decadal environmental ‘memory’ in a reef coral? Marine Biology. https://doi.org/10.1007/s00227-014-2596-2Coral diseases in aquaria and in nature
Sweet, Michael J., Jones, Rachel and Bythell, John C. 2013. Coral diseases in aquaria and in nature. https://doi.org/10.1017/S0025315411001688Development of bacterial biofilms on artificial corals in comparison to surface-associated microbes of hard corals
Sweet, Michael J., Croquer, Aldo, Bythell, John C. and Lopez-Garcia, Purification 2013. Development of bacterial biofilms on artificial corals in comparison to surface-associated microbes of hard corals. https://doi.org/10.1371/journal.pone.0021195Characterisation of the bacterial and fungal communities associated with different lesion sizes of Dark Spot Syndrome occurring in the Coral Stephanocoenia intersepta
Sweet, Michael J., Burn, Deborah, Croquer, Aldo, Leary, Peter and Bereswill, Stefan 2013. Characterisation of the bacterial and fungal communities associated with different lesion sizes of Dark Spot Syndrome occurring in the Coral Stephanocoenia intersepta. https://doi.org/10.1371/journal.pone.0062580Evidence of melanoma in wild marine fish populations
Sweet, Michael J., Kirkham, Nigel, Bendall, Mark, Currey, Leanne, Bythell, John C., Heupel, Michelle and Vartanian, Jean-Pierre 2013. Evidence of melanoma in wild marine fish populations. https://doi.org/10.1371/journal.pone.0041989