A methodology for biomedical ontology reuse

Conference paper

Zulkarnain, NZ and Meziane, F. 2016. A methodology for biomedical ontology reuse. 21st International Conference on Applications of Natural Language to Information Systems, NLDB 2016. Salford, UK 22 - 24 Jun 2016 Springer. https://doi.org/10.1007/978-3-319-41754-7_1
AuthorsZulkarnain, NZ and Meziane, F.
TypeConference paper
Abstract

The abundance of biomedical ontologies is beneficial to the
development of biomedical related systems. However, existing biomedical
ontologies such as the National Cancer Institute Thesaurus (NCIT),
Foundational Model of Anatomy (FMA) and Systematized Nomenclature
of Medicine-Clinical Terms (SNOMED CT) are often too large to be
implemented in a particular system and cause unnecessary high usage of
memory and slow down the system’s processing time. Developing a new
ontology from scratch just for the use of a particular system is deemed as
inefficient since it requires additional time and causes redundancy. Thus,
a potentially better method is by reusing existing ontologies. However,
currently there are no specific methods or tools for reusing ontologies.
This paper aims to provide readers with a step by step method in reusing
ontologies together with the tools that can be used to ease the process.

KeywordsBiomedical ontology; BioPortal; Ontology; Ontology reuse
Year2016
Conference21st International Conference on Applications of Natural Language to Information Systems, NLDB 2016
JournalNatural Language Processing and Information Systems
PublisherSpringer
ISSN03029743
Digital Object Identifier (DOI)https://doi.org/10.1007/978-3-319-41754-7_1
Web address (URL)http://dx.doi.org/10.1007/978-3-319-41754-7_1
Journal citationVol 9612, pp. 3 - 14
ISBNIBSN: 978-3-319-41754-7
Web address (URL) of conference proceedingshttps://link.springer.com/book/10.1007/978-3-319-41754-7
Output statusPublished
Publication dates
Online17 Jun 2016
Publication process dates
Deposited05 Jun 2023
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